FastQCFastQC Report
Fri 2 Sep 2022
EGAF00003443032

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003443032
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences653233
Sequences flagged as poor quality0
Sequence length51
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGTC310194.7485353618081145No Hit
TCTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGT42140.6450990687855634No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCG16510.2527428957202101No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)