FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003443734

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003443734
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2450277
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACAGGTTGGGATCTCGTATGCCGTC309631.2636530482063864No Hit
TCTTATACACATCTCCGAGCCCACGAGACAGGTTGGGATCTCGTATGCCGT42150.1720213673800962No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)