FastQCFastQC Report
Fri 2 Sep 2022
EGAF00003443964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003443964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences730102
Sequences flagged as poor quality0
Sequence length51
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTC130111.7820797641973314No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGT19360.26516842852094635No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCG7360.10080783233027714No Hit

[OK]Adapter Content

Adapter graph