FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003444167

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003444167
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2148495
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTC415501.9339118778493782No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGT70370.3275315976997852No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCG24850.11566235900013731No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)