FastQCFastQC Report
Fri 10 May 2024
EGAF00003444631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003444631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences437787036
Total Bases66.1 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC23

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATTAGTGAATGGTGTTTATTTTGAAGGAGTTGTTAGTGATAATTGGAGT35857420.8190608001466723No Hit
TATTAGTGAATTGAATTGTTTGTGTTTATTTTGTGTGTATGTGTAGGAAA19352550.4420539762168745No Hit
TATTAGTGAATGTATGTTGGATTTTGTGGGATATTTTTGTTTTTTTGTTT14760250.33715594081684963No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)