FastQCFastQC Report
Thu 16 Jun 2022
EGAF00003444641

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003444641
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences439327097
Sequences flagged as poor quality0
Sequence length151
%GC23

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTATGATGTAGGTGTTTATTTTGAAGGAGTTGTTAGTGATAATTGGAGT34040150.7748247315598655No Hit
TGTATGATGTATGAATTGTTTGTGTTTATTTTGTGTGTATGTGTAGGAAA19385490.44125413916820155No Hit
TGTATGATGTAGTATGTTGGATTTTGTAGGATATTTTTGTTTTTTTGTTT17565760.39983329323299177No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)