FastQCFastQC Report
Sat 24 Dec 2022
EGAF00003444643

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003444643
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences427416889
Sequences flagged as poor quality0
Sequence length151
%GC23

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGAGTAGTGGTGTTTATTTTGAAGGAGTTGTTAGTGATAATTGGAGT36002590.8423296066805634No Hit
GTATGAGTAGTTGAATTGTTTGTGTTTATTTTGTGTGTATGTGTAGGAAA19469340.45551171469969687No Hit
GTATGAGTAGTGTATGTTGGATTTTGTAGGATATTTTTGTTTTTTTGTTT10304470.24108710407089226No Hit
GTATGAGTAGTGTATGTTGGATTTTGTGGGATATTTTTGTTTTTTTGTTT7926650.18545476802625832No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)