FastQCFastQC Report
Mon 30 May 2022
EGAF00003444644

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003444644
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences427416889
Sequences flagged as poor quality0
Sequence length151
%GC23

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAAACAATAACATCCATCTCAAAAAAATCACCAACAATAACCAAAAT28607640.6693146840063214No Hit
ACACAAACAATATACACTAAACTTTATAAAATACCCTCACTTTCCTACTC15739860.3682554528162316No Hit
ACACAAACAATTAAATTATTCACATTTACCTTACATATACACACAAAAAA12846190.3005541037476411No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)