FastQCFastQC Report
Sat 1 Apr 2023
EGAF00003446569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003446569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31304090
Sequences flagged as poor quality0
Sequence length35-76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1282010.409534345192593No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT728930.23285455670489066No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT689150.2201469520436467No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)