FastQCFastQC Report
Tue 13 Sep 2022
EGAF00003446573

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003446573
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26681486
Sequences flagged as poor quality0
Sequence length35-76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT882220.33064875022328216No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT503870.18884630338804967No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT482000.1806496084963184No Hit
TCCCAGTATCATGCTATGTGCAAAGAAGGTTTCCAATAATCTTAGTAATG432120.16195499755898154No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA401800.15059131264278158No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)