FastQCFastQC Report
Wed 14 Sep 2022
EGAF00003446583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003446583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24835517
Sequences flagged as poor quality0
Sequence length35-76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1112840.44808408860584625No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT627940.2528395120584766No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT625990.25205434620104744No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)