FastQCFastQC Report
Sat 1 Apr 2023
EGAF00003446591

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003446591
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24667309
Sequences flagged as poor quality0
Sequence length35-76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1271630.5155122514579924No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT727200.29480313397784896No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT700830.2841128718175136No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)