FastQCFastQC Report
Sat 13 May 2023
EGAF00003446614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003446614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37817326
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTT582880.15413041101848396No Hit
ATCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATT464570.12284580882318333No Hit
ATCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTG437780.11576175428162214No Hit
ATCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGC431410.11407734116367721No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)