FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003447879

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003447879
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41030
Sequences flagged as poor quality0
Sequence length35-151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN26086.356324640506947No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACCCAAGTCTATCTCGTATGC830.20229100658055083No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACCCAAGTCTATCTCGTAT440.10723860589812334No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)