FastQCFastQC Report
Sat 23 Apr 2022
EGAF00003470720

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470720
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11721640
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG3918650.011.570431145
CTTGAAA516000.010.383001145
GTCTTCG55650.09.770668145
AGGGGGG286350.08.937286145
TGAAAAG371950.08.927073145
CTGCTTG668600.08.848139145
AAGGGGG271300.08.845173145
AAAAGGG292850.08.763674145
TCTGCTT736000.08.471275145
GAAAAGG303150.08.370254145
AAAGGGG316150.08.117798145
TTCTGCT783750.08.093915145
CCGTCTT1038600.08.055373145
CGTCTTC952900.08.02663145
TTGAAAA527100.07.9224153145
CTCATCG503900.07.72606145
GCCGTCT1075850.07.6686454145
CGTCTTG42050.07.5860343145
TCGTATG1158400.07.5477395145
GTCTTCT927400.07.543769145
Produced by FastQC (version 0.11.5)