FastQCFastQC Report
Sat 23 Apr 2022
EGAF00003470721

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470721
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11721640
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGTATA10503.8198777E-1112.428588145
TAGGTCG23100.010.984862145
GTCGCCG116750.09.935773145
CGCCGTA71250.09.259662145
GGGGGGG11578000.09.129201145
GCCGTAT74150.08.995291145
TGGTCGC136200.08.62336145
CCGTATC66950.08.446613145
CGTATCA65300.08.43799145
CCGGATC26250.08.285726145
CGCCGGA25400.08.27757145
TGGGGGG1143000.07.87162145
TCGCCGT85100.07.854833140-144
GGTCGCC125000.07.783557140-144
GTATCAT82800.07.7053237145
GTGGTCG174000.07.541676145
AGAGCGG80050.07.426618145
AGGGGGG286350.07.3930607145
CGGTGGG116100.07.368658145
CGGGGGG294850.07.352053145
Produced by FastQC (version 0.11.5)