FastQCFastQC Report
Sat 23 Apr 2022
EGAF00003470723

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470723
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27589088
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATCA488550.010.357881140-144
CGCCGTA615700.010.089953140-144
CCGTATC537250.010.054229140-144
GCCGTAT570700.010.022579140-144
TCGCCGT673850.09.644511140-144
GTCGCCG750800.09.486543140-144
GTATCAT498750.09.40112140-144
GGTCGCC821500.09.183727140-144
TGGTCGC890400.09.027819140-144
GTGGTCG970200.08.855235140-144
TCGGTGG1254350.08.198198140-144
CTCGGTG1344550.08.159098140-144
TCTCGGT1413350.08.091026140-144
CGGTGGT1194400.07.994796140-144
GGTGGTC1143150.07.94759140-144
TATCATT550400.07.862202140-144
ATCATTA533700.07.800618140-144
TCATTAA531650.07.272716140-144
AGATCTC1855500.07.2029757140-144
TAGATCT1934550.07.196724140-144
Produced by FastQC (version 0.11.5)