FastQCFastQC Report
Sat 23 Apr 2022
EGAF00003470725

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470725
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28207880
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA208050.010.299294140-144
GCCGTAT199350.010.069754140-144
TCGCCGT243850.09.684861140-144
CCGTATC194150.09.590327140-144
GTCGCCG271200.09.557737140-144
CGTATCA172650.09.541831140-144
GGTCGCC304250.08.850816140-144
GTGGTCG365200.08.836563140-144
TGGTCGC334550.08.793861140-144
TCTCGGT552450.08.109224140-144
TCGGTGG501550.08.085199140-144
CTCGGTG532850.08.012942140-144
CGGTGGT497300.07.5548854140-144
GTGTAGA1023200.07.015795140-144
GTATCAT228000.06.90963140-144
GGTGGTC514850.06.8274627140-144
TAGATCT854450.06.8255973140-144
AGATCTC829950.06.681806140-144
GTAGATC1188900.06.1772776140-144
TGTAGAT1210750.05.7470465140-144
Produced by FastQC (version 0.11.5)