FastQCFastQC Report
Sat 23 Apr 2022
EGAF00003470732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26061133
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGAAA1075900.09.588425140-144
CTGCTTG1457300.08.85168140-144
CGTCTTC2028150.08.835344140-144
TCTGCTT1567200.08.73264140-144
CCGTCTT2193650.08.620394140-144
GCCGTCT2299550.08.572829140-144
TTCTGCT1708700.08.473832140-144
GTCTTCT2016200.08.424185140-144
TGCCGTC2458500.08.357117140-144
TTGAAAA1165450.08.296901140-144
TGAAAAA1108200.08.227849140-144
ATGCCGT2595550.08.183812140-144
TATGCCG2747300.08.088194140-144
GTATGCC2953850.07.82146140-144
TCTTCTG2064750.07.8041596140-144
CGTATGC3098350.07.7267127140-144
TCGTATG3213550.07.5926685140-144
GACGTAT14307.0439783E-67.55853651
CTCGTAT3398800.07.439821140-144
CTTCTGC2087800.07.3800354140-144
Produced by FastQC (version 0.11.5)