FastQCFastQC Report
Sat 23 Apr 2022
EGAF00003470733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26061133
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATCA879750.010.837248140-144
GTATCAT834850.010.793985140-144
GCCGTAT1046550.010.607005140-144
CCGTATC968350.010.598125140-144
CGCCGTA1138100.010.453445140-144
TCGCCGT1253100.010.1537075140-144
GTCGCCG1356850.010.001338140-144
TATCATT840150.09.841494140-144
GGTCGCC1473200.09.72266140-144
ATCATTA788350.09.64062140-144
TGGTCGC1599000.09.490861140-144
TCATTAA749900.09.3937235140-144
GTGGTCG1731900.09.27307140-144
CATTAAA723600.08.9769535140-144
GGTGGTC1948200.08.716566140-144
TCGGTGG2191600.08.654563140-144
CGGTGGT2094700.08.58815140-144
CTCGGTG2331100.08.467748140-144
TCTCGGT2471800.08.309067140-144
AGATCTC3078650.07.5079875140-144
Produced by FastQC (version 0.11.5)