FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003470876

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470876
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2028715
Sequences flagged as poor quality0
Sequence length25-359
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG197020.9711566188449339No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT188170.9275329457316578No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)