FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003470882

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470882
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1832657
Sequences flagged as poor quality0
Sequence length25-338
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG183891.0034065294269467No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT136120.7427467332948827No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)