FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003470889

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470889
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1228230
Sequences flagged as poor quality0
Sequence length8-344
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG100880.8213445364467566No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT70310.5724497854636347No Hit
AATTAGGCTGTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAA50090.4078226390822566No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA31940.2600490136212273No Hit
AATTAGGCTGTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTGGAAAG27710.2256092100013841No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)