FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003470891

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470891
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1066079
Sequences flagged as poor quality0
Sequence length8-622
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG262182.459292416415669No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT161361.5135838901244654No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA14080.1320727638383272No Hit
GTGTCATGCCCGCCTCTTCACGGGCAGGTCAATTTCACTGGTTAAAAGTA13830.12972772186676595No Hit
AAATCTTACCCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAG10800.10130581317144415No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)