FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003470899

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470899
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1007427
Sequences flagged as poor quality0
Sequence length25-319
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG117311.1644516178343443No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT94250.9355516578372427No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG12880.12785045467314257No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT11800.11713007493346912No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)