FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003470901

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470901
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1028157
Sequences flagged as poor quality0
Sequence length25-369
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG126021.225688294686512No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT97190.945283648314411No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA13430.13062207425519645No Hit
GGCAGGTCAATTTCACTGGTTGAAAGTAAGAGACAGCTGAACCCTCGTGG10650.10358340214578124No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT10410.1012491282946087No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)