FastQCFastQC Report
Fri 9 Sep 2022
EGAF00003470904

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470904
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1516851
Sequences flagged as poor quality0
Sequence length25-361
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT121650.8019904394037384No Hit
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG119280.7863659647519764No Hit
ATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCAC15780.10403131223831476No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)