FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003470906

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470906
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1225742
Sequences flagged as poor quality0
Sequence length25-325
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG90670.7397152092365278No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT90600.7391441265780238No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)