FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003470907

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470907
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1084089
Sequences flagged as poor quality0
Sequence length8-335
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG200601.850401581419976No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT149501.3790380679077088No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA49470.45632784762136686No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG19670.1814426675300644No Hit
AATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGTA12370.11410502274259769No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)