FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003470911

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470911
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1092457
Sequences flagged as poor quality0
Sequence length25-317
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG94520.8652056785759075No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT69060.6321530275333492No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA11080.10142275622747622No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)