FastQCFastQC Report
Sat 10 Sep 2022
EGAF00003470950

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470950
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2110434
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT114660.5433005722993469No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT69210.32794202519481774No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60840.28828193632210247No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)