FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003470961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1991767
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT115780.581292892190703No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT71800.36048393210651647No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT55560.27894829063841303No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)