FastQCFastQC Report
Fri 9 Sep 2022
EGAF00003470977

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470977
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2107227
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT177640.8430036251433756No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT104200.49448872855178866No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT89620.4252982711402236No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)