FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003470997

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003470997
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1503636
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT64320.42776310224016983No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT49590.3298005634342354No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT44400.29528423102399787No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)