FastQCFastQC Report
Mon 12 Sep 2022
EGAF00003471036

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003471036
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4151155
Sequences flagged as poor quality0
Sequence length94
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT101230.24385984141762954No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT62800.15128319708611218No Hit
CTCTAGGACTGGCCAGTGGGTGTTCTAGAGGCCAGCTGGGGTTGGAAGAC61920.14916330515242143No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT49240.11861758956242299No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)