FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003471048

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003471048
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1466456
Sequences flagged as poor quality0
Sequence length94
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT73970.5044133611918803No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT42830.2920646783810766No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT38420.2619921770581593No Hit
CTTATACACATCTCCGAGCCCACGAGACTCCTGAGCATCTCGTATGCCGT25660.17497967889933283No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)