FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003471066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003471066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2998617
Sequences flagged as poor quality0
Sequence length94
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT162890.5432170897450391No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT92530.30857558667879226No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT86090.28709901931457066No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)