FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003471078

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003471078
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1975108
Sequences flagged as poor quality0
Sequence length94
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT87430.44265933812226976No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT51250.2594794816283464No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT39210.1985207897492188No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)