FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003471109

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003471109
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2135
Sequences flagged as poor quality0
Sequence length94
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT110.5152224824355972No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT90.4215456674473068No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT70.32786885245901637No Hit
CTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGT50.234192037470726No Hit
CTCTAGGACTGGCCAGTGGGTGTTCTAGAGGCCAGCTGGGGTTGGAAGAC40.18735362997658078No Hit
ATTGAAGAGTATGCAATGAGCGATTTTAGGTCTGTTTGTCGTATGCCGTC40.18735362997658078No Hit
GACCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCTCGTATG30.1405152224824356No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGC30.1405152224824356No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.1405152224824356No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACA30.1405152224824356No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)