FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003471120

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003471120
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1157879
Sequences flagged as poor quality0
Sequence length89
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30030.25935352485017865No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT22070.19060713597880263No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20260.17497510534347718No Hit
GTTTTATTGTCTCTGCCTGGACTTCTAACATAGCATATGAGGTGAAAACA14950.12911539115917986No Hit
GGGATATACAAAGTGGAAATAGACACCAAATCTTACTGGAAGGCACTTGG13510.11667885849903142No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)