FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003471183

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003471183
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1287697
Sequences flagged as poor quality0
Sequence length89
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT63320.49173058568902467No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40720.3162234594007752No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT37770.2933143433587249No Hit
CTTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGT26530.2060267283374893No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)