FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003471240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003471240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2091253
Sequences flagged as poor quality0
Sequence length89
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT68070.3254986364634026No Hit
GATCAGCACCATGAAGCTTCTCACGGGCCTGGTTTTCTGCTCCTTGGTCC51910.24822438987535225No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40310.19275525247303887No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT32720.1564612220520425No Hit
GTGTACCCTCTCCCCGCTTTGTATCCCTGCCCTGAGGGCCTCACAGCCAG22130.10582172506148227No Hit
ATTATATGCCATATCTCAGCTTCTCTGGACATAGACCTCACTAACTTTGT22050.10543917928629391No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)