FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003471420

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003471420
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2755533
Sequences flagged as poor quality0
Sequence length89
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT133180.4833184723245921No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT80500.29213948807726126No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT63450.230263981596301No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)