FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003471490

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003471490
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2357589
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT93440.39633710540726136No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT54850.23265293484148425No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT43840.1859526830164206No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)