FastQCFastQC Report
Mon 12 Sep 2022
EGAF00003471575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003471575
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4084694
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT310480.7601058977734929No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT153510.37581762550634146No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT143880.35224180807668826No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)