FastQCFastQC Report
Tue 5 Jul 2022
EGAF00003474415

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003474415
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences428365443
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCATATGAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT21602570.5043023510185438No Hit
AGCCATATGAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA17091790.39900020599934344No Hit
AGCCATATGAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5565640.12992738072011098No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)