FastQCFastQC Report
Fri 16 Dec 2022
EGAF00003474416

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003474416
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences436472101
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCATATGAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT26849840.6151559272284393No Hit
AGCCATATGAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA17547190.40202317535983817No Hit
AGCCATATGAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC7952930.18220935500296728No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)