FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003474755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003474755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences393938554
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA2167450.010.0393811
TCGGAAG2167850.09.9040892
CGGAAGA2639700.08.3097483
AGAGCAC3970350.05.84798577
AGCACAC4185950.05.5485599
GAGCACA4250800.05.5116548
Produced by FastQC (version 0.11.5)