FastQCFastQC Report
Sun 2 Apr 2023
EGAF00003477278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003477278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65771598
Sequences flagged as poor quality0
Sequence length35-51
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTT1229540.186940873779591No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGA750150.11405378960079396No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)