FastQCFastQC Report
Wed 11 May 2022
EGAF00003490869

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003490869
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9447844
Sequences flagged as poor quality0
Sequence length150-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG284220.3008305386922138No Hit
CTCAAGACACCTTCCGAGCGTCAGCTCACTCCCCTTCCACCCTCAGCTCC109560.11596296467215166No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTA105950.11214198710308934No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)